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SRX3090746: ITS2 amplicon of the fungal endophyte metacommunity from the root of Mercurialis annua sampled within brule in a truffle ground
1 ION_TORRENT (Ion Torrent PGM) run: 57,493 spots, 8.1M bases, 5.7Mb downloads

Design: Pool of two PCR amplifications using ITS86/ITS4 and ITS3/ITS4-OF primer pairs, both specifically targeting the ITS2 spacer region of fungal species.
Submitted by: Museum national d'Histoire naturelle
Study: Fungal microbiome of herbaceous plant roots collected on truffle grounds (Tuber melanosporum)
PRJNA397712 • SRP115350 • All experiments • All runs
show Abstracthide Abstract
Sequencing of the fungal community within herbaceous plant roots collected on truffle grounds (natural or man-made woodlands where the Périgord black truffle Tuber melanosporum is harvested) in France
Sample: Sampled within brule
SAMN07498292 • SRS2428391 • All experiments • All runs
Organism: Mercurialis annua
Library:
Name: LASC1Z14Iion
Instrument: Ion Torrent PGM
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 57,493 spots, 8.1M bases, 5.7Mb
Run# of Spots# of BasesSizePublished
SRR593042357,4938.1M5.7Mb2017-08-12

ID:
4380451

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